ZCoR: Local Installation Steps

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1. Install the codebase

git clone https://github.com/zeroknowledgediscovery/zcor.git
cd zcor
git checkout dev

2. Extract the conda environment file

In current folder, run:

python3 extract_env_file.py -p PREDICTORS/ASD.pickle -s zcor_environment.yml

3. Create the conda environment

conda env create -f midway_environment.yml
conda activate zcor

4. Install zedstat (TODO ADD zedstat to conda)

pip install zedstat

5. Run the sample run of loaded ZCoR object

In current folder, run:

python3 run_zcor_model.py -p PREDICTORS/ASD.pickle -d DATA/OMNI_PEDIATRIC -n SCRIPT_RUN -s PREDICTIONS -b BYPRODUCTS -v True